SZ22
FASTA
Metadata
Reference
Data
identifier | SZ22 |
---|---|
alternative_identifiers | - |
country | Hungary |
continent | Europe |
region | Pannonia |
culture | Longobards |
epoch | Middle Ages |
group | LONG |
comment | - |
latitude | 46.78821563720703 |
longitude | 17.842775344848633 |
sex | M |
site | Szólad |
site_detail | - |
mt_hg | N1b1b1 |
ychr_hg | I2a2a1b2a2a2 |
year_from | 412 |
year_to | 604 |
date_detail | 412-604 CE, single generation burial site, mid. 6th century |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | True |
avg_coverage | 5.440000057220459 |
sequence_source | reconstructed |
reference | Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link) |
data_link | https://www.ncbi.nlm.nih.gov/biosample/8513200 |
ychr_snps | ['ZS20'] |
mitopathos | [{'allele': '16390A', 'position': 16390, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['POAG - potential for association']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}, {'allele': '8836G', 'position': 8836, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['LHON']}] |