SZ27B

FASTA

Metadata

Reference

Data

identifier SZ27B
alternative_identifiers -
country Hungary
continent Europe
region Pannonia
culture Longobards
epoch Middle Ages
group LONG
comment -
latitude 46.78821563720703
longitude 17.842775344848633
sex M
site Szólad
site_detail -
mt_hg N1a1a1a1
ychr_hg R1b1a1a2a1a2
year_from 412
year_to 538
date_detail 412-538
bp 1595±27
c14_lab_code -
c14_sample_tag True
c14_layer_tag -
avg_coverage 2.950000047683716
sequence_source reconstructed
reference Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/biosample/8513204
ychr_snps ['S116']
mitopathos [{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '15043A', 'position': 15043, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['MDD-associated']}, {'allele': '3336C', 'position': 3336, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ND1'], 'diseases': ['Carotid atherosclerosis risk']}]