SZ7

FASTA

Metadata

Reference

Data

identifier	SZ7
alternative_identifiers	-
country	Hungary
continent	Europe
region	Pannonia
culture	Longobards
epoch	Middle Ages
group	LONG
comment	-
latitude	46.78821563720703
longitude	17.842775344848633
sex	M
site	Szólad
site_detail	-
mt_hg	T2e
ychr_hg	I2a2a1b2a2a2
year_from	412
year_to	604
date_detail	412-604 CE, single generation burial site, mid. 6th century
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	True
avg_coverage	4.699999809265137
sequence_source	reconstructed
reference	Amorim et al. 2018. Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/biosample/8513190
ychr_snps	['ZS20']
mitopathos	[{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]