Saxtorp5164

FASTA

Metadata

Reference

Data

identifier Saxtorp5164
alternative_identifiers -
country Sweden
continent Europe
region Scandinavia
culture Funnel Beaker Culture
epoch Neolithic
group FBC
comment Early Neolithic
latitude 55.845001220703125
longitude 12.968999862670898
sex F
site Kvärlöv, Saxtorp, Skåne, Sweden
site_detail ind. 3
mt_hg T2b
ychr_hg -
year_from -3945
year_to -3647
date_detail 3945–3647 calBCE
bp 4975±75
c14_lab_code Ua-9808
c14_sample_tag True
c14_layer_tag -
avg_coverage 0.5870000123977661
sequence_source fasta
reference Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MG429049.1
ychr_snps -
mitopathos [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]