UzOO77
FASTA
Metadata
Reference
Data
identifier | UzOO77 |
---|---|
alternative_identifiers | - |
country | Russia |
continent | Europe |
region | Baltic |
culture | Eastern/Mesolithic Hunter-Gatherers |
epoch | Mesolithic |
group | HGN |
comment | - |
latitude | 62.04600143432617 |
longitude | 35.36399841308594 |
sex | F |
site | Yuzhnyy Oleni Ostrov, Karelia, Russia |
site_detail | grave 54, MAE RAS 5773-77 |
mt_hg | R1b |
ychr_hg | - |
year_from | -5500 |
year_to | -5000 |
date_detail | 5500–5000 BCE |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | True |
avg_coverage | 0.7329999804496765 |
sequence_source | fasta |
reference | Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link) |
data_link | https://www.ncbi.nlm.nih.gov/nuccore/MG428995.1 |
ychr_snps | - |
mitopathos | [{'allele': '1095C', 'position': 1095, 'status': 'Unclear', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-RNR1'], 'diseases': ['SNHL']}, {'allele': '1391C', 'position': 1391, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-RNR1'], 'diseases': ['found in 1 HCM patient']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}] |
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UzOO77