Veibri4
FASTA
Metadata
Reference
Data
identifier | Veibri4 |
---|---|
alternative_identifiers | ['KIA-48843'] |
country | Estonia |
continent | Europe |
region | Baltic |
culture | Narva |
epoch | Neolithic |
group | NEBL |
comment | Eastern Middle Neolithic |
latitude | 58.20199966430664 |
longitude | 26.46500015258789 |
sex | F |
site | Veibri, Estonia |
site_detail | quadruple burial, Veibri I/IV |
mt_hg | U5b1 |
ychr_hg | - |
year_from | -4900 |
year_to | -4720 |
date_detail | 4900–4720 calBCE |
bp | 5940±22 |
c14_lab_code | KIA-48843 |
c14_sample_tag | True |
c14_layer_tag | - |
avg_coverage | 1.0470000505447388 |
sequence_source | fasta |
reference | Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link) |
data_link | https://www.ncbi.nlm.nih.gov/nuccore/MG429011.1 |
ychr_snps | - |
mitopathos | [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}] |
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Veibri4