arm14

FASTA

Metadata

Reference

Data

identifier arm14
alternative_identifiers ['Karkar', 'N6']
country Armenia
continent Asia
region Caucasus
culture Armenian
epoch Middle Ages
group MACA
comment -
latitude 39.790000915527344
longitude 46.849998474121094
sex U
site Karkar
site_detail -
mt_hg U1a1a
ychr_hg -
year_from 1700
year_to 1800
date_detail 1700-1800 AD
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 28.600000381469727
sequence_source fasta
reference Margaryan et al. 2017. Eight Millennia of Matrilineal Genetic Continuity in the South Caucasus. Current Biology, 27(13), 2023-2028.e7. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MF362696
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '228A', 'position': 228, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Low VO2max response']}]