arm30

FASTA

Metadata

Reference

Data

identifier arm30
alternative_identifiers ['Curgan 22']
country Armenia
continent Asia
region Caucasus
culture Lchashen-Metsamor
epoch Bronze Age
group BACA
comment Late Bronze Age
latitude 40.150001525878906
longitude 45.25
sex U
site Nerqin Getashen
site_detail -
mt_hg U8b1a2b
ychr_hg -
year_from -1500
year_to -1300
date_detail 1500-1300 BC
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 63.099998474121094
sequence_source fasta
reference Margaryan et al. 2017. Eight Millennia of Matrilineal Genetic Continuity in the South Caucasus. Current Biology, 27(13), 2023-2028.e7. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MF362712
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '14831A', 'position': 14831, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['LHON']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '9055A', 'position': 9055, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['PD protective factor']}]