arm45

FASTA

Metadata

Reference

Data

identifier arm45
alternative_identifiers ['Tomb 462']
country Armenia
continent Asia
region Caucasus
culture Trialeti-Vanadzor 2
epoch Bronze Age
group BACA
comment Middle Bronze Age
latitude 40.40999984741211
longitude 44.56999969482422
sex U
site Karashamb
site_detail -
mt_hg T
ychr_hg -
year_from -1800
year_to -1600
date_detail 1800-1600 BC
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag True
avg_coverage 11.699999809265137
sequence_source fasta
reference Margaryan et al. 2017. Eight Millennia of Matrilineal Genetic Continuity in the South Caucasus. Current Biology, 27(13), 2023-2028.e7. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MF362726
ychr_snps -
mitopathos [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]