mota

Metadata

Reference

Data

identifier mota
alternative_identifiers ['Mota']
country Ethiopia
continent Africa
region eastern Africa
culture Mota
epoch Bronze Age
group BAAF
comment -
latitude 6.800000190734863
longitude 38.209999084472656
sex M
site Mota Cave, Gamo Highlands
site_detail -
mt_hg L3x2a
ychr_hg E1b1a2
year_from -2575
year_to -2469
date_detail 2575-2469 calBCE (3997±29 BP, OxA-29631)
bp 3997±29
c14_lab_code OxA-29631
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source <NA>
reference Llorente et al. 2015. Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa. Science, 350(6262), 820-822. (link)
data_link https://www.ncbi.nlm.nih.gov/sra?term=PRJNA295861
ychr_snps ['E1b1:P2:21610831G->A', 'E1:CTS955:7104553C->T', 'E1:CTS5913:16550700G->A', 'E1:CTS9083:18662674G->A', 'E1:CTS9753:19058376G->A', 'E:CTS860:7052802A->T', 'E:CTS2893:14545105G->A', 'E:CTS3199:14718400A->G', 'E:CTS4685:15768559C->T', 'E:CTS4994:15945309G->A', 'E:CTS5316:16203354A->G', 'E:CTS6755:17092499G->T', 'E:CTS8631:18118658C->G', 'E:CTS10296:19379113T->C', 'E:CTS10344:19414935G->T', 'E:CTS10894:22823374A->C', 'E:CTS11504:23142339C->G', 'E:L504:21385724C->G', 'E:L507:22688731G->C', 'E:L614:23249378C->T', 'E:M40:2663943C->T', 'E:M5382:6631743C->A', 'E:M5406:7913358G->A', 'E:M5416:8469322C->T', 'E:M5417:8532844C->T', 'E:M5418:8612630C->G', 'E:M5422:8703052T->G', 'E:M5425:8799243T->C', 'E:M5431:9394763A->T', 'E:M5527:21256219G->A', 'E:M5533:21408046G->C', 'E:M5545:21747107T->C', 'E:M5569:24399592C->T', 'E:M5571:24437979C->T', 'E:P154:19500107G->T', 'E:P169:22918577C->T', 'E:P171:23443971G->T', 'E:P172:6965215C->T', 'E:P174:15809326G->A', 'E:PF1608:13559017G->T', 'E:PF1620:13883812C->A', 'E:PF1843:22270345G->A', 'E:PF1844:22270687T->G', 'E:PF1864:22469799A->C', 'E:Z15669:13424256G->T', 'E:Z15670:13470384C->G', 'E:Z15673:13828327G->A', 'E:Z15674:13841166G->A', 'E:Z15681:22271529A->C', 'E:PF1567:8908270G->A', 'E1b1a2:M329:2875527G->C', 'E1b1a:TSC0077541:6818291C->T', 'E1b1:P178:7401836G->A', 'E1b1:P179:14060308A->C', 'E1b1:P180:18601274G->A', 'E1b1:P181:17394111C->G', 'E1b:P177:14159846C->T', 'E1:CTS6355:16842077C->T', 'E1:CTS8432:18023975A->G', 'E1:M5413:8375407C->T', 'E1:M5421:8389216C->T', 'E1:M5534:21453551C->G', 'E1:P147:21083420T->A', 'E1:PF1593:9971695C->T', 'E1:Z15559:4014267A->G', 'E:CTS433:6750775T->G', 'E:CTS939:7098985A->G', 'E:CTS1008:7138496C->T', 'E:CTS1074:7184140C->T', 'E:CTS1262:7298921A->G', 'E:CTS2401:14291692T->G', 'E:CTS2496:14329233C->T', 'E:CTS3337:14845090C->T', 'E:CTS3749:15151001G->A', 'E:CTS3774:15172192G->T', 'E:CTS4373:15617734C->T', 'E:CTS6048:16636022T->Chet', 'E:CTS6513:16960786G->C', 'E:CTS6818:17123088T->C', 'E:CTS7138:17314682A->G', 'E:CTS7824:17686886T->A', 'E:CTS8053:17814087G->A', 'E:CTS8189:17867791A->G', 'E:CTS8269:17907131C->T', 'E:CTS8754:18181803T->C', 'E:CTS9440:18894151T->C', 'E:CTS9663:19016577T->C', 'E:CTS9799:19073088C->T', 'E:CTS10330:19402470C->T', 'E:CTS11216:23018125G->T', 'E:CTS11599:23185647C->A', 'E:CTS11622:23196336C->A', 'E:CTS11644:23202275A->G', 'E:CTS11681:23212564C->T', 'E:CTS11811:23288854C->T', 'E:CTS11916:23353901C->A', 'E:CTS12798:28708145G->T', 'E:L339:6931856C->T', 'E:L511:23059591G->A', 'E:L537:6861075G->A', 'E:L856:8485542C->A', 'E:M96:21778998C->G', 'E:M5396:7210300C->T', 'E:M5403:7602644T->C', 'E:M5410:8188581T->Chet', 'E:M5424:8795235C->T', 'E:M5426:8810775T->A', 'E:M5428:8842509G->C', 'E:M5436:9443407C->T', 'E:M5438:9805161G->A', 'E:M5439:9840350A->G', 'E:M5452:14474359T->C', 'E:M5525:21192906T->C', 'E:M5529:21314704T->Chet', 'E:M5539:21565962A->T', 'E:M5540:21576051T->G', 'E:M5543:21652284C->T', 'E:M5548:22158261A->T', 'E:M5550:22646728G->A', 'E:M5564:23463283G->A', 'E:M5566:23538555T->A', 'E:P29:14497207A->C', 'E:P150:16846439C->A', 'E:P152:14664631G->C', 'E:P155:16338537G->A', 'E:P156:17420017A->G', 'E:P162:6000464T->C', 'E:P168:21618583G->C', 'E:P170:15021522G->A', 'E:P173:6995523A->G', 'E:P175:14804077G->A', 'E:P176:15935524T->G', 'E:PF1459:3321201G->C', 'E:PF1472:4093591C->A', 'E:PF1473:4097242A->G', 'E:PF1476:4276602T->C', 'E:PF1603:13325232G->Ahet', 'E:PF1618:13802034G->Ahet', 'E:PF1868:22538799C->T', 'E:PF1917:24356128C->T', 'E:Z15667:9376415C->T', 'E:Z15668:13366817G->Ahet', 'E:Z15671:13666276G->Ahet', 'E:Z15672:13679813C->A', 'E:Z15680:22228270T->Chet', 'E:Z15683:22467047C->T']
mitopathos -