poz280

FASTA

Metadata

Reference

Data

identifier	poz280
alternative_identifiers	-
country	Poland
continent	Europe
region	central Europe
culture	Corded Ware
epoch	Neolithic
group	CWC
comment	-
latitude	50.399166107177734
longitude	21.059999465942383
sex	U
site	Malżyce
site_detail	Kurgan I, grave 2
mt_hg	W5b
ychr_hg	-
year_from	-2800
year_to	-2300
date_detail	2800 -2300 BC
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	57.0
sequence_source	reconstructed
reference	Juras et al. 2018. Mitochondrial genomes reveal an east to west cline of steppe ancestry in Corded Ware populations. Scientific Reports, 8(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/popset/1464230165
ychr_snps	-
mitopathos	[{'allele': '11696A', 'position': 11696, 'status': 'Reported - possibly synergistic', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND4'], 'diseases': ['LHON / LDYT / DEAF / hypertension helper mut.']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]