AmtDB | Database

Search

Advanced search

Identifier

Haplogroup

C14 dated

Has FASTA

Year from-to (exact )

slider

Year from

Year to

Avg. coverage from-to (exact )

slider

Avg. coverage from

Avg. coverage to

Actions

Download FASTA	All	Selected	Separated
Download metadata	All	Selected
Show on map	All	Selected

Table
Map

Name	Group	Epoch	Country	Sex	Year from	Year to	Haplogroup	Sequence source	Avg. coverage	Reference	Download	Map	Pathologies
Denisova3	HGE	Upper Paleolithic	Russia	F	-48000	-30000	L	bam	<NA>	Krause et al. 2010 Data	FASTA Metadata		10398G (MT-ND3): PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy (Reported / lineage L & M marker / also hg IJK) 12311C (MT-TL2): CPEO (Reported) 12372A (MT-ND5): Altered brain pH / sCJD patients (Reported) 12477C (MT-ND5): possible HCM susceptibility (Reported) 12705T (MT-CO1): Possible protective factor for normal tension glaucoma (Reported) 13276G (MT-ND5): MIDD+retinopathy (Conflicting reports) 13528G (MT-ND5): LHON-like / LHON / MELAS (Reported) 14693G (MT-TE): MELAS / LHON / DEAF / hypertension helper (Reported) 15043A (MT-CYB): MDD-associated (Reported) 150T (MT-CR): Longevity / Cervical Carcinoma / HPV infection risk (Conflicting reports) 16081G (MT-CR): Cyclic Vomiting Syndrome (Reported) 16129A (MT-CR): Cyclic Vomiting Syndrome with Migraine (Reported) 310C (MT-CR): Possible protective factor for normal tension glaucoma (Reported) 3277A (MT-TL1): Poss. hypertension factor (Reported) 3290C (MT-TL1): Poss. hypertension factor (Reported) 3421A (MT-ND1): MIDD (Reported) 3496T (MT-ND1): LHON (Reported / Secondary) 4456T (MT-TM): Poss. hypertension factor (Reported) 4659A (MT-ND2): possible PD risk factor / LHON (Reported) 5821A (MT-TC): DEAF helper mut. (Reported) 6150A (MT-CO1): Prostate Cancer / enriched in POAG cohort (Reported) 7868T (MT-CO2): LHON (Possibly synergistic) 827G (MT-RNR1): DEAF (Conflicting reports) 8021G (MT-CO2): Asthenozoospermia (Reported) 9966A (MT-CO3): LHON possible helper variant (Reported)